Due to a server failure, the main bionetgen website is down. Please bear with us while we get our full site back up and running.
This web site serves the BioNetGen user community by providing information about BioNetGen and tools for the development, annotation, and discussion of BioNetGen models.
Please send questions, comments, and account requests to email@example.com. We will treat all help requests, including models or model snippets, as confidential.
In publications that use BioNetGen and related tools please follow our citation guidelines.
Current development of BioNetGen is supported in part by the NIGMS-funded (P41GM103712) National Center for Multiscale Modeling of Biological Systems (MMBioS). Past support has been provided by NIH grants (GM076570, GM103712, GM085273, AI35997, CA109552), NSF grant 0829788, the Arizona Biomedical Research Commission, and the Department of Computational Biology at the University of Pittsburgh School of Medicine.
- RuleBender – the graphical interface for BioNetGen that includes BioNetGen and NFsim source code and executables.
- BioNetGen – command-line only version that includes BioNetGen and NFsim source code.
Documentation and Tutorials
- Introduction to rule-based modeling with BioNetGen and RuleBender
- Quick Reference Guide
- Application Note
- BioNetGen Primer
- BioNetGen Bible
Please send us an email if you want more information that is not provided here: firstname.lastname@example.org.